Bioinformatiikka Jobs

I have assembled the genome-wide WRKY transcription factor sequences for Brassica juncea and now need a complete in-silico analysis focused solely on the gene sequence level. The work must cover three core objectives: • Identification of all WRKY gene family members present in the current assembly, including accurate locus IDs and coding sequences. • Comparative genomics that positions each B. juncea WRKY against its orthologues and paralogues in close Brassica relatives and Arabidopsis, highlighting expansions or losses. • A robust phylogenetic analysis that groups the genes into their canonical WRKY clades with well-supported bootstrap values and a clearly annotated tree ready for publication. Because I have not fixed a pipeline yet, please recommend the most suitabl...

I have a plant transcription factor sequence. I need different analysis like motif, domain, chromosomal location etc.

**Job Title:** Bioinformatics Consultant – LP-WGS (Reproductive Genomics) **Location:** Remote (India preferred) **Engagement Type:** Contract / Freelance (3–6 months, extendable) **Start Date:** Immediate --- ## **About the Project** We are setting up a **clinical-grade bioinformatics pipeline** for **low-pass whole genome sequencing (LP-WGS)** focused on reproductive genomics applications including: * Non-Invasive Prenatal Testing (NIPT) * Products of Conception (POC) analysis * Recurrent Pregnancy Loss (RPL) analysis The pipeline must be **robust, reproducible, and compliant with clinical lab standards (NABL/ISO 15189)**. --- ## **Scope of Work** You will design, develop, and validate an end-to-end bioinformatics pipeline for LP-WGS data. ### **Key Responsibilities...

I need a phylogenetic tree constructed using DNA sequences. The preferred software for this is MEGA. Requirements: - Proficiency in using MEGA. - Experience with phylogenetic analysis and tree construction. - Familiarity with interpreting DNA sequence data. Ideal Skills: - Background in bioinformatics or evolutionary biology. - Attention to detail and accuracy in data analysis. Please provide examples of similar work done.